Deborah Chasman

Deborah Chasman

Deborah Chasman

Post Docotoral Research Associate, Systems Biology

Years Active

2012-present

Education

  • B.A., Computer Science, Carleton College
  • Ph.D., Computer Sciences, University of WisconsinMadison

Research Description

  • Postdoc work: Computational gene prioritization from integrated -omics data in support of systems virology.
  • PhD work: Integer linear programming-based methods for inferring interpretable, mechanistic biological subnetworks.

Selected Publications

  • Chasman D, Ho YH, Berry DB, Nemec CM, MacGilvray ME, Hose J, Merrill AE, Lee MV, Will JL, Coon JJ, Ansari AZ, Craven M, Gasch AP (2014) Pathway connectivity and signaling coordination in the yeast stress-activated signaling network. Mol Syst Biol 10(11):759. doi: 10.15252/msb.20145120
  • Chasman D, Gancarz B, Hao L, Ferris M, Ahlquist P, Craven M (2014) Inferring host gene subnetworks involved in viral replication. PLoS Comput Biol 10(5): e1003626. doi:10.1371/journal.pcbi.1003626