| Project | Sponsor | Investigators | Started |
|---|---|---|---|
| Collaborative Research: National Symposium on PRedicting Emergence of Virulent Entities by Novel Technologies (PREVENT) | National Science Foundation | John Yin | 2021 |
| Mechanism of UVB-induced DNA methylation suppression and inheritance in plants | National Science Foundation | Xuehua Zhong | 2021 |
| Searching for dynamic biosignatures among lifelike systems isolated by chemical ecosystem selection ( Lena Vincent - NASA FINESST) | NASA, Goddard Space Flight Center | David Baum | 2020 |
| Choline-dependent metabolism in PNS myelination | Rutgers (NIH) | James Dowell John Svaren | 2020 |
| Using Data to Foster Entrepreneurship and Innovation in the Madison Ecosystem: An AmFam-UW Research Collaboration | American Family Mutual Insurance | Jonathan Eckhardt | 2020 |
| Comparing the efficacy and cellular impact of non-viral, hepatocyte-targeted delivery vehicles with viral-mediated gene delivery in a microphysiological liver on chip platform | Medical College of Wisconsin | Shaoqin Gong | 2020 |
| Enabling Nanoplatforms for Targeted In Vivo Delivery of CRISPR/Cas9 Ribonucleoproteins in the Brain | DHHS, PHS, National Institutes Of Health | Shaoqin Gong Krishanu Saha Walter Block Marina Emborg Jon Levine Brian Yandell | 2020 |
| A World Without Soil | Alfred P Sloan Foundation | Jo Handelsman | 2020 |
| Studying Inclusive Mentor Networks to Diversify the Biomedical Workforce | UCSF (NIH) | Jo Handelsman | 2020 |
| Genetic and Metabolic Determinants of Microbial Interactions in the Rhizosphere (Postdoc Fellowship Chevrette) | USDA, Natl Institute Food & Agriculture | Jo Handelsman | 2020 |
| VILAS Professorship | William F Vilas Trust Estate | Jo Handelsman | 2020 |
| Optimizing Q&A Systems via User Feedback | American Family Mutual Insurance | Robert Nowak | 2020 |
| Theoretical Foundations of Deep Learning | Rice University (DOD, Navy) | Robert Nowak | 2020 |
| Developing a Novel 3D Capture Based Automated Inventory System for Insurance Documentation | American Family Mutual Insurance | Kevin Ponto | 2020 |
| Becoming Joey: Promoting Informal Learning through Embodiment in an Adelie Penguin Virtual Reality Experience | National Science Foundation | Kevin Ponto David Gagnon James Madsen | 2020 |
| ECA-PGR: Transcriptional Regulation and Gene Networks Underlying Viral Recognition of Insect Vectors in Host Plants Clare Casteel PI | Cornell University (NSF) | Sushmita Roy | 2020 |
| Single Cell Profiling To Define Biomarkers Of Photoreceptor Dysfunction After Gene Editing Within PSC-Derived Organoids | DHHS, PHS, National Institutes Of Health | Krishanu Saha David Gamm Bikash Pattnaik Sushmita Roy Rupa Sridharan | 2020 |
| CAREER: Understanding visual reasoning for visual communication | National Science Foundation | Karen Schloss | 2020 |
| Harnessing the power of big omics data: Novel statistical tools to study the role of microbial communities in fundamental biological processes | Department of Energy | Claudia Solis-Lemus | 2020 |
| R01 Renewal: Collaboration of chromatin remodeling and signaling pathways in pluripotency | DHHS, PHS, National Institutes Of Health | Rupa Sridharan | 2020 |
| TRIPODS: Collaborative: Institute for Foundations of Data Science (IFDS) | National Science Foundation | Stephen Wright Cecile Ane Michael Newton Rob Nowak Sebastian Roch | 2020 |
| A New Paradigm for Systems Physiology Modeling: Biomechanistic Learning Augmentation with Deep Differential Equation Representations (BLADDER) | Florida International University (NIH) | John Yin | 2020 |
| Ecological dynamics of human coronavirus: models and measures | National Science Foundation | John Yin | 2020 |
| EAGER: Rapid and Sensitive Drug Testing for COVID-19 | National Science Foundation | John Yin Michael Graham | 2020 |
| Human microphysiological model of afferent nociceptive signaling | Tulane University | Randolph Ashton | 2019 |
| Mixed-Integer Quadratic Optimization: Algorithms and Complexity | DOD, Navy | Alberto Del Pia | 2019 |
| Reversible protein acetylation and sirtuin function | DHHS, PHS, National Institutes Of Health | John Denu Tomas Prolla | 2019 |
| Inventor Search Data Analytics | Wisconsin Alumni Research Foundation | Jonathan Eckhardt | 2019 |
| Genetic Determinants Of Microbial Community Interactions In The Rhizosphere | USDA, Natl Institute Food & Agriculture | Jo Handelsman | 2019 |
| EAGER: Development of a Research Tool to Investigate Factors that Influence Researchers' Attitudes about Engagement in Public Science Events | National Science Foundation | Jo Handelsman Dominique Brossard Noah Feinstein Dietram Scheufele | 2019 |
| Investigating energy efficiency, information processing and control architectures of microbial community interaction networks | USC (DOD, MURI) | Jo Handelsman Ophelia Venturelli | 2019 |
| Collaborative Research: Physics-Based Machine Learning for Sub-Seasonal Climate Forecasting | National Science Foundation | Robert Nowak Stephen Wright | 2019 |
| Regionalized Human Motor Neuron Therapies | DHHS, PHS, National Institutes Of Health | Randolph Ashton | 2018 |
| Research Project titled: Explanation Based Active Learning | American Family Mutual Insurance | Robert Nowak | 2018 |
| TRIPODS+X:RES: Collaborative Research: Data Science Frontiers in Climate Science - University of Chicago sub-award to UW-Madison | University Of Chicago | Garvesh Raskutti Stephen Wright | 2018 |
| Comparative regulatory genomics to decipher mammalian long-range gene regulation | DHHS, PHS, National Institutes Of Health | Sushmita Roy | 2018 |
| Gene Editing Nanomedicines to Correct Pathogenic Mutations in the Retina | Foundation Fighting Blindness | Krishanu Saha David Gamm Shaoqin Gong Bikash Pattnaik | 2018 |
| Data Science Hub for UW-Madison | Wisconsin Alumni Research Foundation | Brian Yandell | 2018 |
| A novel direction in mixed integer polynomial optimization: structural properties, polyhedral approximations, and global optimization algorithms | National Science Foundation | Alberto Del Pia | 2017 |
| The Microbiome Hub: Enabling a Biological Revolution at UW-Madison | Wisconsin Alumni Research Foundation | Jo Handelsman | 2017 |
| Inference for autoregressive point processes | Ntl Geospatial-Intelligence Agency | Garvesh Raskutti | 2017 |
| TRIPODS: Institute for Foundations of Data Science | National Science Foundation | Stephen Wright Rebecca Lu Michael Newton Rob Nowak Sebastian Roch | 2017 |
| Uncovering the epigenetic codes for genome integrity and environmental interaction | DHHS, PHS, National Institutes Of Health | Xuehua Zhong | 2017 |
| RCN: Advancing Research and Education Through a National Network of Campus Research Computing Infrastructures - The CaRC Consortium | Clemson University (NSF) | Lauren Michael | 2016 |
| Using an evolutionary framework to study robustness and predictive power of data-driven molecular regulatory networks | McDonnell (James S) Foundation | Sushmita Roy | 2016 |
| Computational Inference of Regulatory Network Dynamics on Cell Lineages | DHHS, PHS, National Institutes Of Health | Sushmita Roy Rupa Sridharan | 2016 |
| Assembly of Novel Gene Editing Particles to Understand Genome Surgery in Patient-Derived Cells | DHHS, PHS, National Institutes Of Health | Krishanu Saha | 2016 |